Gallium in PDB 5xhl: Crystal Structure of Hasap with Gallium Phthalocyanine
Protein crystallography data
The structure of Crystal Structure of Hasap with Gallium Phthalocyanine, PDB code: 5xhl
was solved by
O.Shoji,
Y.Shisaka,
Y.Iwai,
H.Sugimoto,
Y.Shiro,
Y.Watanabe,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
38.41 /
2.50
|
Space group
|
P 61
|
Cell size a, b, c (Å), α, β, γ (°)
|
153.625,
153.625,
36.761,
90.00,
90.00,
120.00
|
R / Rfree (%)
|
19 /
23.8
|
Gallium Binding Sites:
The binding sites of Gallium atom in the Crystal Structure of Hasap with Gallium Phthalocyanine
(pdb code 5xhl). This binding sites where shown within
5.0 Angstroms radius around Gallium atom.
In total 2 binding sites of Gallium where determined in the
Crystal Structure of Hasap with Gallium Phthalocyanine, PDB code: 5xhl:
Jump to Gallium binding site number:
1;
2;
Gallium binding site 1 out
of 2 in 5xhl
Go back to
Gallium Binding Sites List in 5xhl
Gallium binding site 1 out
of 2 in the Crystal Structure of Hasap with Gallium Phthalocyanine
 Mono view
 Stereo pair view
|
A full contact list of Gallium with other atoms in the Ga binding
site number 1 of Crystal Structure of Hasap with Gallium Phthalocyanine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ga201
b:26.9
occ:1.00
|
GA
|
A:VPC201
|
0.0
|
26.9
|
1.0
|
N4
|
A:VPC201
|
2.2
|
26.1
|
1.0
|
OH
|
A:TYR75
|
2.2
|
21.1
|
1.0
|
NE2
|
A:HIS32
|
2.2
|
22.6
|
1.0
|
N1
|
A:VPC201
|
2.3
|
20.7
|
1.0
|
N6
|
A:VPC201
|
2.3
|
22.8
|
1.0
|
N2
|
A:VPC201
|
2.3
|
25.0
|
1.0
|
C12
|
A:VPC201
|
3.1
|
26.3
|
1.0
|
C11
|
A:VPC201
|
3.1
|
26.1
|
1.0
|
CZ
|
A:TYR75
|
3.1
|
23.0
|
1.0
|
C15
|
A:VPC201
|
3.2
|
23.0
|
1.0
|
C8
|
A:VPC201
|
3.2
|
24.3
|
1.0
|
CD2
|
A:HIS32
|
3.2
|
24.8
|
1.0
|
C4
|
A:VPC201
|
3.2
|
21.8
|
1.0
|
CE1
|
A:HIS32
|
3.2
|
25.7
|
1.0
|
C3
|
A:VPC201
|
3.2
|
20.2
|
1.0
|
C16
|
A:VPC201
|
3.2
|
21.9
|
1.0
|
C7
|
A:VPC201
|
3.3
|
23.8
|
1.0
|
N8
|
A:VPC201
|
3.4
|
24.3
|
1.0
|
N5
|
A:VPC201
|
3.4
|
24.7
|
1.0
|
N3
|
A:VPC201
|
3.5
|
21.7
|
1.0
|
N7
|
A:VPC201
|
3.5
|
20.7
|
1.0
|
CE1
|
A:TYR75
|
3.8
|
23.1
|
1.0
|
CE2
|
A:TYR75
|
3.9
|
22.7
|
1.0
|
ND1
|
A:HIS83
|
4.0
|
28.1
|
1.0
|
C9
|
A:VPC201
|
4.2
|
27.2
|
1.0
|
C10
|
A:VPC201
|
4.2
|
26.5
|
1.0
|
C14
|
A:VPC201
|
4.3
|
23.2
|
1.0
|
ND1
|
A:HIS32
|
4.3
|
26.0
|
1.0
|
C1
|
A:VPC201
|
4.3
|
21.4
|
1.0
|
C13
|
A:VPC201
|
4.3
|
22.7
|
1.0
|
C2
|
A:VPC201
|
4.3
|
20.4
|
1.0
|
C5
|
A:VPC201
|
4.3
|
25.2
|
1.0
|
CG
|
A:HIS32
|
4.3
|
27.1
|
1.0
|
C6
|
A:VPC201
|
4.4
|
25.2
|
1.0
|
CG
|
A:HIS83
|
4.8
|
27.8
|
1.0
|
CE1
|
A:HIS83
|
4.8
|
29.6
|
1.0
|
CB
|
A:HIS83
|
4.8
|
26.6
|
1.0
|
|
Gallium binding site 2 out
of 2 in 5xhl
Go back to
Gallium Binding Sites List in 5xhl
Gallium binding site 2 out
of 2 in the Crystal Structure of Hasap with Gallium Phthalocyanine
 Mono view
 Stereo pair view
|
A full contact list of Gallium with other atoms in the Ga binding
site number 2 of Crystal Structure of Hasap with Gallium Phthalocyanine within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ga201
b:39.0
occ:1.00
|
GA
|
B:VPC201
|
0.0
|
39.0
|
1.0
|
OH
|
B:TYR75
|
2.2
|
36.7
|
1.0
|
N6
|
B:VPC201
|
2.3
|
39.1
|
1.0
|
N1
|
B:VPC201
|
2.3
|
41.7
|
1.0
|
N4
|
B:VPC201
|
2.3
|
41.7
|
1.0
|
N2
|
B:VPC201
|
2.4
|
45.0
|
1.0
|
NE2
|
B:HIS32
|
2.4
|
44.5
|
1.0
|
CZ
|
B:TYR75
|
3.1
|
36.0
|
1.0
|
C15
|
B:VPC201
|
3.2
|
39.8
|
1.0
|
C12
|
B:VPC201
|
3.2
|
42.6
|
1.0
|
C3
|
B:VPC201
|
3.2
|
42.5
|
1.0
|
C16
|
B:VPC201
|
3.2
|
39.9
|
1.0
|
C4
|
B:VPC201
|
3.2
|
42.6
|
1.0
|
CD2
|
B:HIS32
|
3.2
|
46.4
|
1.0
|
C11
|
B:VPC201
|
3.3
|
43.6
|
1.0
|
C8
|
B:VPC201
|
3.3
|
43.8
|
1.0
|
C7
|
B:VPC201
|
3.3
|
43.6
|
1.0
|
CE1
|
B:HIS32
|
3.4
|
46.1
|
1.0
|
N8
|
B:VPC201
|
3.4
|
39.9
|
1.0
|
N7
|
B:VPC201
|
3.5
|
41.5
|
1.0
|
N3
|
B:VPC201
|
3.5
|
44.6
|
1.0
|
N5
|
B:VPC201
|
3.5
|
43.9
|
1.0
|
CE2
|
B:TYR75
|
3.9
|
34.4
|
1.0
|
CE1
|
B:TYR75
|
3.9
|
36.5
|
1.0
|
ND1
|
B:HIS83
|
4.0
|
30.2
|
1.0
|
C14
|
B:VPC201
|
4.3
|
41.1
|
1.0
|
C13
|
B:VPC201
|
4.3
|
40.3
|
1.0
|
C2
|
B:VPC201
|
4.3
|
41.5
|
1.0
|
C1
|
B:VPC201
|
4.3
|
42.3
|
1.0
|
C9
|
B:VPC201
|
4.3
|
42.5
|
1.0
|
C10
|
B:VPC201
|
4.4
|
43.9
|
1.0
|
C5
|
B:VPC201
|
4.4
|
44.2
|
1.0
|
C6
|
B:VPC201
|
4.4
|
45.2
|
1.0
|
CG
|
B:HIS32
|
4.4
|
47.0
|
1.0
|
ND1
|
B:HIS32
|
4.4
|
46.3
|
1.0
|
CE1
|
B:HIS83
|
4.6
|
30.7
|
1.0
|
CG
|
B:HIS83
|
4.8
|
32.1
|
1.0
|
CB
|
B:HIS83
|
5.0
|
31.4
|
1.0
|
|
Reference:
O.Shoji,
Y.Shisaka,
Y.Iwai,
H.Sugimoto,
Y.Shiro,
Y.Watanabe.
Crystal Structure of Hasap with Gallium Phthalocyanine To Be Published.
Page generated: Sat Aug 10 21:10:42 2024
|